Fix Code Mode workspace context propagation

docs/rfc/implemented/feature/2026-06-15-code-mode.md

@@ -36,11 +36,11 @@ Three decisions, each elaborated in its own section below:
 
 Under `'code'` and `'both'` the registry registers `run_code` in itself as an ordinary tool — one required parameter `{ code: string }` — so the unchanged loop dispatches it through the normal pipeline and `tools/pre-execute` / `tools/post-execute` gate it like any other call (a permission plugin can inspect the program text before it runs). Its `execute(args, exec)`:
 
-1. **Builds the bindings**: the bridge owns a **run-scoped `AbortController`** whose signal follows `exec.signal` (an outer cancel propagates in) and which the bridge itself fires the moment the run settles for any reason — completion, program exception, `computeMs`/`maxWallMs` expiry, worker exit. For every registered tool except `run_code`, the binding is an async function that (a) checks the run signal before and after (throwing stops the program — necessary because `ctx.tools.execute()` converts errors to `isError` data), (b) **JSON-normalizes the argument** — a `JSON.parse(JSON.stringify(args))` round-trip, rejecting that one call with a descriptive `Error` when the value does not survive (`BigInt`, circular structures) — because the seam's structured-clone boundary is wider than JSON while the session log accepts only JSON: normalizing BEFORE dispatch makes the dispatched form and the logged form the same JSON value by construction, so an executed sub-call can never fail at logging time, (c) awaits its turn on the **per-run serialization queue** (below), (d) calls `this.execute({ callId, name, arguments, agent: exec.agent, signal: runSignal })` with a deterministic sub-id `` CallId(`${exec.callId}:code:${n}`) `` — the run signal, not the bare outer one, so a budget expiry aborts an in-flight sub-tool (`bash-local` kills on its spec signal) instead of orphaning it, (e) appends a `tool/code-dispatch` session event, and (f) maps the result: success → the text-block contents joined as a `string` (non-text blocks become placeholders, an MVP limitation), `isError` → **the binding rejects** with an `Error` carrying the result text. Rejection is the deliberate model-facing contract — real code signals failure by throwing, `try/catch` and `Promise.all` short-circuiting behave as every model has seen them behave — where the old draft's `{ output, isError }` envelope made error handling a bespoke convention.
+1. **Builds the bindings**: the bridge owns a **run-scoped `AbortController`** whose signal follows `exec.signal` (an outer cancel propagates in) and which the bridge itself fires the moment the run settles for any reason — completion, program exception, `computeMs`/`maxWallMs` expiry, worker exit. For every registered tool except `run_code`, the binding is an async function that (a) checks the run signal before and after (throwing stops the program — necessary because `ctx.tools.execute()` converts errors to `isError` data), (b) **JSON-normalizes the argument** — a `JSON.parse(JSON.stringify(args))` round-trip, rejecting that one call with a descriptive `Error` when the value does not survive (`BigInt`, circular structures) — because the seam's structured-clone boundary is wider than JSON while the session log accepts only JSON: normalizing BEFORE dispatch makes the dispatched form and the logged form the same JSON value by construction, so an executed sub-call can never fail at logging time, (c) awaits its turn on the **per-run serialization queue** (below), (d) calls `this.execute({ callId, name, arguments, agent: exec.agent, signal: runSignal })` with a deterministic sub-id `` CallId(`${exec.callId}:code:${n}`) `` — the run signal, not the bare outer one, so a budget expiry aborts an in-flight sub-tool (`bash-local` kills on its spec signal) instead of orphaning it, (e) defers every returned `additionalContexts` entry through the parent `ToolRunContext`, (f) appends a `tool/code-dispatch` session event, and (g) maps the result: success → the text-block contents joined as a `string` (non-text blocks become placeholders, an MVP limitation), `isError` → **the binding rejects** with an `Error` carrying the result text. Rejection is the deliberate model-facing contract — real code signals failure by throwing, `try/catch` and `Promise.all` short-circuiting behave as every model has seen them behave — where the old draft's `{ output, isError }` envelope made error handling a bespoke convention.
 2. **Runs the program**: `ctx.codeRuntime.run({ program: args.code, bindings: [{ global: 'tools', functions }], signal: exec.signal })`.
 3. **Surfaces the outcome — after reaching quiescence.** When `ctx.codeRuntime.run()` resolves, the bridge fires the run-scoped abort (cancelling any in-flight sub-dispatch and abandoning queued-unstarted ones), then **awaits the dispatch queue's drain before returning**, per the dispose-to-quiescence rule in [defensive patterns](../../../defensive-patterns.md): an aborted in-flight sub-call still settles and logs its `isError` `tool/code-dispatch` event *inside* the open turn, and nothing can append after `run_code` returns. A successful run then returns one text block — the captured console/stdout output followed by the rendered return value (if any) — plus a `meta` payload (capped logs, dispatch count) for presentation. A run with `result.error` throws a `CodeRunFailedError extends HarnessError` (`code: 'CODE_RUN_FAILED'`, message = the error kind and text plus captured logs so the model can self-correct); the registry's existing catch turns it into a structured `isError` result.
 
-**Sub-call `additionalContext` is suppressed, deliberately.** A `tools/post-execute` hook may attach `additionalContext` to a call; for loop-dispatched calls the loop buffers those and appends each as a `context/message` only after the step's `tool/result`s, preserving call/result adjacency. A sub-dispatch result's `additionalContext` has no such safe outlet from inside a running `run_code`: injecting immediately would land a `context/message` between the parent's `tool/call` and its `tool/result` (breaking the adjacency the buffering exists to protect), and `PostToolDecision.additionalContext` is singular where a program may produce many. The MVP therefore drops sub-call `additionalContext`, pinned by a test and stated in the hooks bridge's docs; the follow-up (a plural context channel or loop-level sub-dispatch buffering) is deferred until a real hook needs it through Code Mode.
+**Sub-call contexts are deferred through the parent.** A `tools/post-execute` hook may attach `additionalContexts` to any sub-call. Injecting them inside a running `run_code` would land `context/message` events between the parent's `tool/call` and `tool/result`, so each tool body receives a `ToolRunContext.deferContext()` collector instead. The bridge feeds every sub-result context into that collector in serialized dispatch order; the registry preserves the collected array even when the program later throws, and the unchanged loop appends each entry only after the outer result and every sibling result in the step. Each `HookContext` remains separate, retaining source, envelope, and metadata. If an outer post-execute listener blocks `run_code`, the registry discards the tool-deferred entries and exposes only contexts explicitly attached by the blocking decision, matching native block semantics and preventing rejected-call context leakage.
 
 **Concurrency: serialized, enforced by the binding.** The bindings are async, so a model writing `Promise.all([tools.a(…), tools.b(…)])` starts both immediately — concurrent dispatch would be the *default*, while the tool contract still carries no concurrency-safety metadata (the open parallel-execution TODO). Each `run_code` invocation therefore owns a dispatch queue and every binding call chains onto it, so even `Promise.all` executes the underlying `ctx.tools.execute()` calls one at a time in submission order; when the run settles, queued-but-unstarted dispatches are abandoned. Lifting this per-tool once tools can declare themselves concurrency-safe is deferred work, same as before.
 
@@ -91,16 +91,16 @@ What exists now:
 - **The seam**: `packages/code-runtime/` — `@deepseek-ai/dsh-code-runtime` (abstract `CodeRuntime`, the vocabulary above, `ctx.codeRuntime`) and `@deepseek-ai/dsh-code-runtime-worker` (the worker-thread backend, every cap a validated config field). Rows in the service map, capability-seams graph, config catalog, and cordis catalog.
 - **The registry surface**: `ToolRegistry`'s first config (`mode`), the mode-aware wire contribution, the `tools:sdk` section, `jsonSchemaToTs`/`renderToolsSdk` (exported), `run_code` + the dispatch bridge + `CodeRunFailedError`, and the `tool/code-dispatch` log event (declaration-merged into `SessionEventMap`, regenerated into the persistence catalog; `run_code` in the tool catalog).
 - **The composed surface**: the `tools` config forwards through `agent-core` and both app packages (`stdio-agent`, `acp-agent`); `demo:code-mode` boots each UI example's `code-mode.cordis.yml` overlay (the worker runtime + `mode: 'code'` over the base tree); the adding-a-tool cookbook states that a registered tool is reachable from programs for free, and the tool-pipeline doc shows sub-dispatches re-entering both waterfalls.
-- **Interactions inherited by deployments**: a `toolOrder` naming native tools rejects every assembly under `'code'` (update or drop the order config when switching modes); sub-call `additionalContext` is dropped by the bridge (a plural context channel is deferred until a real hook needs it through Code Mode); sub-dispatch stays serialized until tools can declare concurrency safety — the same metadata the native parallel-dispatch TODO waits on.
+- **Interactions inherited by deployments**: a `toolOrder` naming native tools rejects every assembly under `'code'` (update or drop the order config when switching modes); sub-call contexts are deferred to the outer result and preserve provenance/metadata; sub-dispatch stays serialized until tools can declare concurrency safety — the same metadata the native parallel-dispatch TODO waits on.
 
 ## Testing
 
 What the suites pin, per tier:
 
 - **Unit — worker runtime** (real workers, no mocks): output/value capture and log-source attribution; error kinds (exception incl. non-erasable syntax, abort, worker-exit under OOM); the two budgets from both sides (a hot loop behind an un-awaited pending dispatch dies at `computeMs` busy time; a program idling on a slow binding outlives `computeMs` and dies only at `maxWallMs`); binding-bridge hostility (junk/forged port traffic incl. non-object messages and forged `log`/`done` cap bypass attempts, unknown names, duplicate ids, post-settlement replies, `__proto__`/`constructor`/`toString` binding names); structured-clone fallback and cap truncation; `env` emptiness verified from inside a program; dispose-awaits-exit. A real-load-path e2e runs the BUILT package under plain `node` so the worker entry resolves both unbuilt (tsx) and built — the published-artifact guard from [docs/testing.md](../../../testing.md).
-- **Unit — registry integration**: the codegen table (DSL subset, quoted names, `unknown` degradation, byte-identical determinism); provider contribution per mode (`'native'` unchanged, `'code'` exactly `[run_code]`, `'both'` all + `run_code`); `toolOrder × mode` rejection; missing-runtime / wrong-language loud failures; serialization non-overlap (a probe tool records enter/exit under `Promise.all`); abort aborting the in-flight sub-dispatch and abandoning queued ones; binding rejection on `isError` and on JSON-unrepresentable arguments; `CodeRunFailedError` → structured `isError` carrying kind + logs; `tool/code-dispatch` payloads (JSON-normalized arguments identical to what dispatched); `deriveMessages()` ignoring the event; sub-call `additionalContext` suppression; HMR safety (disposing the registry removes the tool and the section).
-- **e2e (with-key, self-skips)**: a real model under `mode: 'code'` composes two bash calls in one program (`examples/coding-agent/tests/code-mode.e2e.ts`) — every logged `request/header` carries exactly `[run_code]`, the dispatch events land under the parent call, the file the program wrote exists, and the final answer is the curated output.
-- **Snapshot (keyless replay)**: goldens for a `run_code` turn under `'code'` and `'both'` (`code-mode-turn`, `both-mode-turn`), each its own header-pinning class — the SDK section text, the collapsed header tool list, the dispatch events, and the result card are committed and replayed.
+- **Unit — registry integration**: the codegen table (DSL subset, quoted names, `unknown` degradation, byte-identical determinism); provider contribution per mode (`'native'` unchanged, `'code'` exactly `[run_code]`, `'both'` all + `run_code`); `toolOrder × mode` rejection; missing-runtime / wrong-language loud failures; serialization non-overlap (a probe tool records enter/exit under `Promise.all`); abort aborting the in-flight sub-dispatch and abandoning queued ones; binding rejection on `isError` and on JSON-unrepresentable arguments; `CodeRunFailedError` → structured `isError` carrying kind + logs; `tool/code-dispatch` payloads (JSON-normalized arguments identical to what dispatched); `deriveMessages()` ignoring the event; ordered sub-call context deferral across successful and failed programs; outer-block suppression; HMR safety (disposing the registry removes the tool and the section).
+- **e2e (with-key, self-skips)**: a real model under `mode: 'code'` composes two bash calls in one program (`examples/coding-agent/tests/code-mode.e2e.ts`) — every logged `request/header` carries exactly `[run_code]`, the dispatch events land under the parent call, the file the program wrote exists, and the final answer is the curated output. A second scenario uses `tools.read` inside `run_code`, discovers a nested `AGENTS.md`, verifies its `context/message` follows the outer result, and checks the real model obeys it.
+- **Snapshot (keyless replay)**: goldens for a `run_code` turn under `'code'` and `'both'` (`code-mode-turn`, `both-mode-turn`), each its own header-pinning class, plus `code-mode-workspace-context` for a nested instruction discovered by an fs sub-dispatch — the SDK section text, collapsed header tool list, dispatch events, deferred context order, and result card are committed and replayed.
 
 ## Alternatives considered