Merge remote-tracking branch 'origin/master' into codex/project-instruction-files

# Conflicts:
#	docs/config-catalog.md
#	docs/cordis-catalog/services.md
#	docs/event-producer-consumer.md
#	docs/module-graph.md
#	packages/README.md
#	packages/cordis/tool-cordis/src/api-catalog.ts
#	packages/core/tools/README.md
#	packages/core/tools/src/index.ts
#	packages/ui/stdio-agent/tests/built-bin.e2e.ts

docs/rfc/implemented/architecture/2026-07-07-tool-call-timeout-policy.md

@@ -57,9 +57,8 @@ Signal replacement is by **in-place mutation of `exec.signal`**, not by passing
 `timeout-policy` owns both uses of the `TOOL_TIMEOUT` code: the internal deadline code passed to `deadline()`/`timeoutOf()` (scoped so a nested outer deadline reads as an ordinary cancel) and the structured tool-result error code. Its replacement result is:
 
 ```ts ignore-check
-function toolTimeoutResult(callId: CallId, timeoutMs: number): ToolExecutionResult {
+function toolTimeoutResult(timeoutMs: number): ToolExecutionResult {
   return {
-    callId,
     content: [{ type: 'text', text: `Error: tool call timed out after ${timeoutMs}ms` }],
     isError: true,
     error: { name: 'ToolTimeoutError', code: 'TOOL_TIMEOUT' },