Fix doc cross-links for the hierarchy; add package-path + shape gates
Merge brought in the RFC-classification reorg and two new doc gates; rewrite every drifted packages/<name> cross-link (Markdown link targets, moved-README relative depths, and .ts comment paths) to the grouped paths. Add two doc-sync/hygiene gates so the manual checks this restructure needed become automated: - verify-package-paths.ts: flags a packages/<path> reference (in Markdown or a .ts comment/string) that does not resolve AND names a real package in a segment — i.e. a stale path to a MOVED package. A path naming a non-existent package (a forward-looking proposal) is left alone, so it applies uniformly across proposed/implemented/rejected. - check-workspace-constraints: assert the packages/<group>/<pkg> depth-2 shape (group dirs carry no package.json; no flat or over-nested packages). Group names stay open; only the shape is fixed.
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@@ -23,7 +23,7 @@ The JSONL durable session-persistence backend — a concrete `SessionPersistence
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- **Lazy materialization.** `create(meta)` writes nothing; the `.jsonl` (header + first batch) is written atomically (temp-write + `fsync` + rename) on the first `append`. A created-but-never-appended session leaves nothing on disk and is absent from `has`/`list`.
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- **Append-only.** Committed events (at or below a flushed `turn/end`) are never rewritten. Subsequent appends are line appends at EOF + `fsync`.
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- **Crash recovery — close, don't truncate.** A crash can leave a log whose final turn never closed (real events after the last `turn/end`). `load` PRESERVES those events (a turn can be huge — they are real work) and closes the orphaned turn by durably appending synthetic boundary events: an error `tool/result` for every `tool-call` the crash left unanswered (the loop logs the assistant message before running the tools, so a mid-tool crash leaves dangling calls — and `deriveMessages()` would replay an assistant tool-call with no result, which providers reject), then a `step/end` if a step was open, then `turn/end {kind:'interrupted'}`, returning a balanced log. Only a never-fully-written **torn tail fragment** (a final line with no newline / unparseable) is `ftruncate`d away before the closers are written. See [session persistence](../../docs/rfc/implemented/architecture/2026-06-14-session-persistence.md).
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- **Crash recovery — close, don't truncate.** A crash can leave a log whose final turn never closed (real events after the last `turn/end`). `load` PRESERVES those events (a turn can be huge — they are real work) and closes the orphaned turn by durably appending synthetic boundary events: an error `tool/result` for every `tool-call` the crash left unanswered (the loop logs the assistant message before running the tools, so a mid-tool crash leaves dangling calls — and `deriveMessages()` would replay an assistant tool-call with no result, which providers reject), then a `step/end` if a step was open, then `turn/end {kind:'interrupted'}`, returning a balanced log. Only a never-fully-written **torn tail fragment** (a final line with no newline / unparseable) is `ftruncate`d away before the closers are written. See [session persistence](../../../docs/rfc/implemented/architecture/2026-06-14-session-persistence.md).
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- **Contiguous-seq.** `load` rejects a mid-log parse error or `seq` gap (unloadable); `append` rejects a batch whose first `seq` does not continue the stored log, and rejects non-JSON-serializable `event.data` naming the offending event type.
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- **Format version.** Only v1 is supported; `load` rejects an unknown version. While the harness is unreleased a format change bumps the version and rejects non-current logs — there is no migration (no persisted user data to preserve).
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